HiFive

Introduction
- HiFive Overview
- Organization of the HiFive package
Getting started
- Installing HiFive
- Installing Documentation
Restriction Fragment Handling
- Loading 5C Fragments
- Loading HiC Fends
Loading Data
- Loading 5C data
- Loading HiC Data
Filtering Data
- 5C Filtering
- HiC Filtering
Distance-Dependence Estimation
- 5C Distance-Dependence Estimation
- HiC Distance-Dependence Estimation
Normalizing Data
Using HiFive
Tutorial for 5C Classes
Tutorial for HiC Classes
HiFive’s API

HiFive

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Python Module Index

h


	h
	`hifive`
	`hifive.fend`
	`hifive.fivec`
	`hifive.fivec_binning`
	`hifive.fivec_data`
	`hifive.fragment`
	`hifive.hic`
	`hifive.hic_binning`
	`hifive.hic_data`
	`hifive.plotting`

© Copyright 2015, Michael Sauria.

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